Stats 810 (Fall 2015)
Literature Proseminar
Thursday 10-11; 3265 Undergraduate Science Building (USB)
Syllabus
Instructor: Edward Ionides
The first 8 weeks of Stat 810 will focus on responsible conduct of research and scholarship (RCRS). Instruction in RCRS has recently been demanded by both the National Science Foundation (NSF) and the National Institutes of Health (NIH). To satisfy this federal legislation, the University of Michigan requires certification of 8 hrs of classroom discussion on RCRS for all students and postdocs (http://research-compliance.umich.edu/responsible-conduct-research-rcr-training#
).
There will be a short weekly writing assignment during these 8 weeks so that we are all prepared in advance for each discussion.
Certification of RCRS instruction is advised for all students, since most PhD students and postdocs will at some point be working on federally funded projects. In order to achieve certification, attendance and participation of students is required. Therefore, for the first 8 weeks of 810, it will be necessary to check the attendance of all registered students. The first class of 810 will discuss why RCRS instruction has been mandated, and this would be an appropriate time to raise any concerns you might have about whether RCRS instruction is a worthwhile use of your time. If you cannot be present at class, please contact me: we can arrange a substitution which will involve a writing assignment together with a make-up attendance requirement. If you cannot complete the weekly writing assignment before class, we can arrange a make-up writing assignment.
The 9th class will extend the RCRS discussion to classroom issues arising in your dual roles as instructor and student.
The remaining four classes will discuss various issues related to statistical computation: R, Latex, Unix, integrating text and computation (KnitR, Rmarkdown), parallel computation, communicating statistical methodology (R packages), git.
Reading assignments come from "On Being a Scientist: A Guide to Responsible Conduct in Research: Third Edition,"
written by the Committee on Science, Engineering and Public Policy, and published in 2009 by National Academies Press. A
pdf copy is freely available online.
Homework assignments:
Homework 1, due 5pm on Wednesday 9/9.
pdf.
tex.
class notes.
Homework 2, due 5pm on Wednesday 9/16.
pdf.
tex.
class notes.
Homework 3, due 5pm on Wednesday 9/23.
pdf.
tex.
class notes.
Homework 4, due 5pm on Wednesday 9/30.
pdf.
tex.
class notes.
Homework 5, due 5pm on Wednesday 10/7.
pdf.
tex.
class notes.
Homework 6, due 5pm on Wednesday 10/14.
pdf.
tex.
class notes.
Homework 7, due 5pm on Wednesday 10/21.
pdf.
tex.
class notes.
Homework 8, due 5pm on Wednesday 10/28.
pdf.
tex.
class notes.
Homework 9, due 5pm on Wednesday 11/4.
pdf.
tex.
gompertz.c
class notes.
Homework 10, due 5pm on Wednesday 11/11.
pdf.
class notes.
Homework 11, due 5pm on Wednesday 11/18.
pdf.
gompertzTest.R.
runTest.pbs.
class notes.
Homework 12, due 5pm on Wednesday 12/2.
pdf.
source files.
class notes
A and
B.
Final homework, due Wednesday 12/9. Complete the git/github signup assignment from
class 12. When you have completed this assignment, you are done with Stats 810. If you have completed this assignment before class on 12/10, you do not need to come to class. If you have not completed the assignment, please bring a laptop to class and we can work on it together.